论文标题
切除seg:术中脑肿瘤超声图像的开放访问注释
RESECT-SEG: Open access annotations of intra-operative brain tumor ultrasound images
论文作者
论文摘要
目的:磁共振(MR)和超声(US)图像的注册和分割在手术计划和切除脑肿瘤中起着至关重要的作用。但是,验证这些技术是由于缺乏具有高质量基础真相信息的公共访问来源而具有挑战性的。为此,我们提出了一个独特的注释数据集和先前发表的分区数据集(Xiao等人,2017年)的独特注释数据集,以鼓励对图像处理技术进行更严格的评估。采集和验证方法:分配数据库由23例接受切除手术的患者的MR和术中US(IUS)图像组成。所提出的数据集包含IUS图像的肿瘤组织和切除腔注释。通过几个评估标准,通过两个经验丰富的神经外科医生来验证注释的质量。数据格式和可用性:以3D NIFTI格式提供肿瘤组织和切除腔的注释。两组注释均可在\ url {https://osf.io/6y4db}中在线访问。讨论和潜在应用:拟议的数据库包括来自现实世界中临床超声大脑图像的肿瘤组织和切除腔注释,以评估分割和注册方法。这些标签也可以用于训练深度学习方法。最终,该数据集应进一步提高神经外科图像指导的质量。
Purpose: Registration and segmentation of magnetic resonance (MR) and ultrasound (US) images play an essential role in surgical planning and resection of brain tumors. However, validating these techniques is challenging due to the scarcity of publicly accessible sources with high-quality ground truth information. To this end, we propose a unique annotation dataset of tumor tissues and resection cavities from the previously published RESECT dataset (Xiao et al. 2017) to encourage a more rigorous assessments of image processing techniques. Acquisition and validation methods: The RESECT database consists of MR and intraoperative US (iUS) images of 23 patients who underwent resection surgeries. The proposed dataset contains tumor tissues and resection cavity annotations of the iUS images. The quality of annotations were validated by two highly experienced neurosurgeons through several assessment criteria. Data format and availability: Annotations of tumor tissues and resection cavities are provided in 3D NIFTI formats. Both sets of annotations are accessible online in the \url{https://osf.io/6y4db}. Discussion and potential applications: The proposed database includes tumor tissue and resection cavity annotations from real-world clinical ultrasound brain images to evaluate segmentation and registration methods. These labels could also be used to train deep learning approaches. Eventually, this dataset should further improve the quality of image guidance in neurosurgery.