论文标题

分析细胞尺寸分布:谱系群体偏差和参数推断

Analytical cell size distribution: lineage-population bias and parameter inference

论文作者

Genthon, Arthur

论文摘要

解决种群平衡方程,我们得出了用于单线实验(例如母机)的分析稳态细胞尺寸分布。这些实验与细胞种群自由生长的批处理培养物根本不同,并且通过将我们的结果与人群中测得的细胞大小分布进行比较,可以获得它们之间的统计偏差。对于指数的单细胞生长,表征大多数细菌,明确获得了谱系群体偏差。另外,如果在除药处的子细胞之间均匀分配体积,我们表明细胞的平均种群较小。对于更一般的幂律增长率和确定性的体积分配,无论是对称和不对称的,我们都会得出确切的谱系分布。该解决方案与大肠杆菌母机数据非常吻合,可用于推断细胞周期参数,例如大小控制的强度和分裂的不对称性。在引入随机体积分区时,我们得出了谱系尺寸分布的大小和小尺寸的尾巴,并表明它们分别不取决于体积的分配和尺寸控制强度。最后,我们表明,在体积分配或单细胞生长速率上引入噪声可以抵消谱系人口偏差。

Solving population balance equations, we derive analytical steady-state cell size distributions for single-lineage experiments, such as the mother machine. These experiments are fundamentally different from batch cultures where populations of cells grow freely, and the statistical bias between them is obtained by comparing our results to cell size distributions measured in population. For exponential single-cell growth, characterizing most bacteria, the lineage-population bias is obtained explicitly. In addition, if volume is evenly split between the daughter cells at division, we show that cells are on average smaller in populations. For more general power-law growth rates and deterministic volume partitioning, both symmetric and asymmetric, we derive the exact lineage distribution. This solution is in good agreement with E. Coli mother machine data, and can be used to infer cell cycle parameters, such as the strength of the size control and the asymmetry of the division. When introducing stochastic volume partitioning, we derive the large-size and small-size tails of the lineage size distributions, and show that they respectively do not depend on the partitioning of volume and on the size control strength. Finally, we show that introducing noise, either on the volume partitioning or on the single cell growth rate, can cancel the lineage-population bias.

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