论文标题

在单细胞的薄壁模型中推断相对表面弹性模量

Inferring relative surface elastic moduli in thin-wall models of single cells

论文作者

Deng, Yaqi, Wei, Chaozhen, Xu, Rholee, Vidali, Luis, Wu, Min

论文摘要

在单个壁细胞中不同位置的细胞壁机械性能测量细胞壁机械性能越来越兴趣。我们提出了一种推理方案,该方案基于跟踪沿turgid和松弛的细胞壁轮廓的材料标记点的位置,沿细胞壁绘制相对表面弹性模量分布。主要方案通过计算材料标记点之间的张力和弹性伸展来提供表面弹性模量的逐步推断。我们针对标记点位置上的扰动进行了主要方案的稳定性分析,这可能是由于图像采集和从实验中处理而发生的。扰动分析表明,当标记点之间的间距更加粗糙时,主要方案对噪声更稳定,并且通过数值实验证实,我们将主要方案应用于合成细胞的概述,从超弹性膜变形的仿真中,在标记点位置与随机噪声进行了随机噪声。为了改善主要方案的弹性模量分布的空间分辨率,我们提出了两个优化方案,这些方案将弹性模量的阶段函数推断转换为平滑曲线推断。第一个方案基于来自同一细胞类型的多个细胞样品的标记点位置,渗透了一个规范的弹性模量分布。第二个方案是一个简化的成本效益版本,它根据单个单元格的标记点位置来渗透弹性模量。数值实验表明,第一个方案显着提高了基本规范弹性模量分布的推理精度,当基础弹性模量梯度是非线性时,甚至可以捕获一定程度的非线性。第二个成本效益的方案可以始终如一地预测弹性模量梯度的趋势。

There is a growing interest in measuring the cell wall mechanical property at different locations in single walled cells. We present an inference scheme that maps relative surface elastic modulus distributions along the cell wall based on tracking the location of material marker points along the turgid and relaxed cell wall outline. A primary scheme provides a step-function inference of surface elastic moduli by computing the tensions and elastic stretches between material marker points. We perform stability analysis for the primary scheme against perturbations on the marker-point locations, which may occur due to image acquisition and processing from experiments. The perturbation analysis shows that the primary scheme is more stable to noise when the spacing between the marker points is coarser, and has been confirmed by the numerical experiments where we apply the primary scheme to synthetic cell outlines from simulations of hyper-elastic membrane deformation with random noise on the marker-point locations. To improve the spatial resolution of elastic modulus distribution of the primary scheme with noise, we propose two optimization schemes that convert the step-function inferences of elastic moduli into smooth-curve inferences. The first scheme infers a canonical elastic modulus distribution based on marker-point locations from multiple cell samples of the same cell type. The second scheme is a simplified cost-effective version that infers the elastic moduli based on marker-point locations from a single cell. The numerical experiments show that the first scheme significantly improves the inference precision for the underlying canonical elastic modulus distributions and can even capture some degree of nonlinearity when the underlying elastic modulus gradients are nonlinear. The second cost-effective scheme can predict the trend of the elastic modulus gradients consistently.

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