论文标题

Knowaugnet:多级图形对比度学习的多源医学知识增强药物预测网络

KnowAugNet: Multi-Source Medical Knowledge Augmented Medication Prediction Network with Multi-Level Graph Contrastive Learning

论文作者

An, Yang, Jin, Bo, Wei, Xiaopeng

论文摘要

在许多智能医疗系统中,预测药物是至关重要的任务。根据电子病历(EMRS),它可以帮助医生为患者做出明智的药物决定。但是,由于医疗法规之间的复杂关系,药物预测是一项具有挑战性的数据挖掘任务。大多数现有研究的重点是利用医学本体图图的同质法规之间的固有关系来使用监督方法来增强其表示形式,而很少有研究关注历史EMR的异质或同质医学法规之间的宝贵关系,这进一步限制了预测性能和应用程序方案。因此,为了解决这些局限性,本文提出了Knowaugnet,这是一种多源医学知识增强药物预测网络,可以通过多级图形对比学习框架充分捕获医疗代码之间的不同关系。具体而言,Knowaugnet首先利用图形注意网络作为编码器来捕获从医学本体图形图中捕获均质医疗代码之间的隐式关系,并获得知识增强载体的知识。然后,它利用使用加权图卷积网络的图形对比度学习作为编码器,从构造的医学先验关系图中捕获均质或异质医疗代码之间的相关关系,并获得嵌入矢量的关系增强的医疗代码。最后,将嵌入向量的增强医学法规和嵌入载体的监督医疗法规检索到顺序学习网络中,以捕获医疗法规的时间关系并预测患者的药物。

Predicting medications is a crucial task in many intelligent healthcare systems. It can assist doctors in making informed medication decisions for patients according to electronic medical records (EMRs). However, medication prediction is a challenging data mining task due to the complex relations between medical codes. Most existing studies focus on utilizing inherent relations between homogeneous codes of medical ontology graph to enhance their representations using supervised methods, and few studies pay attention to the valuable relations between heterogeneous or homogeneous medical codes from history EMRs, which further limits the prediction performance and application scenarios. Therefore, to address these limitations, this paper proposes KnowAugNet, a multi-sourced medical knowledge augmented medication prediction network which can fully capture the diverse relations between medical codes via multi-level graph contrastive learning framework. Specifically, KnowAugNet first leverages the graph contrastive learning using graph attention network as the encoder to capture the implicit relations between homogeneous medical codes from the medical ontology graph and obtains the knowledge augmented medical codes embedding vectors. Then, it utilizes the graph contrastive learning using a weighted graph convolutional network as the encoder to capture the correlative relations between homogeneous or heterogeneous medical codes from the constructed medical prior relation graph and obtains the relation augmented medical codes embedding vectors. Finally, the augmented medical codes embedding vectors and the supervised medical codes embedding vectors are retrieved and input to the sequential learning network to capture the temporal relations of medical codes and predict medications for patients.

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