论文标题

定位显微镜:方法和应用的进度回顾

Localization microscopy: a review of the progress in methods and applications

论文作者

Shepherd, Jack W, Leake, Mark C

论文摘要

在这里,我们报告了用于光学成像的定位显微镜领域研究的分析和摘要。我们介绍了用于棕榈和风暴的超级分辨定位显微镜方法的基本元素,该方法通常在体内和体外使用,讨论了背景理论,仪器和计算算法的核心基本要素。我们讨论了光学显微镜的分辨率限制和在该极限之外将荧光染料定位在空间中的数学框架,包括可作为从染料发出的光量的函数获得的精确度,以及它如何导致空间和时间精度之间的基本折衷。概述了“好染料”的特性,棕榈和风暴超分辨率显微镜的特征以及可能需要对实验方案进行定位确定的适应性。我们简要分析了通过重塑点扩散功能以及它们如何利用定位显微镜的各个方面(例如刺激的耗竭(STED)方法和MINFLUX)的一些现代超级分解光学成像的一些方法,并汇总了使用非核苷点传播功能将3D局部化为3D的现代方法。我们报告了用于分析定位数据的当前方法,包括确定2D和3D扩散常数,分子化学计量法以及使用尖端技术进行聚类分析,最后讨论如何使用这些技术来使重要的洞察力对一系列生物学过程。

Here, we report analysis and summary of research in the field of localization microscopy for optical imaging. We introduce the basic elements of super-resolved localization microscopy methods for PALM and STORM, commonly used both in vivo and in vitro, discussing the core essentials of background theory, instrumentation and computational algorithms. We discuss the resolution limit of light microscopy and the mathematical framework for localizing fluorescent dyes in space beyond this limit, including the precision obtainable as a function of the amount of light emitted from a dye, and how it leads to a fundamental compromise between spatial and temporal precision. The properties of a "good dye" are outlined, as are the features of PALM and STORM super-resolution microscopy and adaptations that may need to be made to experimental protocols to perform localization determination. We analyse briefly some of the methods of modern super-resolved optical imaging that work through reshaping point spread functions and how they utilize aspects of localization microscopy, such as stimulated depletion (STED) methods and MINFLUX, and summarize modern methods that push localization into 3D using non-Gaussian point spread functions. We report on current methods for analyzing localization data including determination of 2D and 3D diffusion constants, molecular stoichiometries, and performing cluster analysis with cutting-edge techniques, and finally discuss how these techniques may be used to enable important insight into a range of biological processes.

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