论文标题

持续的流体流由主动物质边界定义

Persistent fluid flows defined by active matter boundaries

论文作者

Qu, Zijie, Schildknecht, Dominik, Shadkhoo, Shahriar, Amaya, Enrique, Jiang, Jialong, Lee, Heun Jin, Phillips, Rob, Thomson, Matt

论文摘要

生物系统通过包括鞭毛,纤毛和细胞骨架网络在内的活性蛋白质结构的自组织实现对环境流体的精确控制。在活性结构中,单个蛋白质消耗化学能,以分子长度尺度产生力和运动。蛋白质成分的自组织可以控制和调制微米尺度上的流体流场。组织驱动的流体流的组织和控制的基本原则知之甚少。在这里,我们应用了由微管丝和可轻开关的运动蛋白运动蛋白组成的光学控制的活动系统,以分析模型活动物质系统中持续流场的出现。使用光,我们形成不同形状的收缩微管网络。我们分析了由多种微管网络几何形状产生的流体流场,并解释了统一的理论框架内所得的流场。我们特别证明,在收缩微管网络边界处的微管通量的几何形状可以通过有限元模拟跨多边形网络几何形状进行稳态流体流动场。我们的工作为具有可控的活动物质编程的微观流体流程编写了基础,并可以实现多功能和动态的微流体设备的工程。

Biological systems achieve precise control over ambient fluids through the self-organization of active protein structures including flagella, cilia, and cytoskeletal networks. In active structures individual proteins consume chemical energy to generate force and motion at molecular length scales. Self-organization of protein components enables the control and modulation of fluid flow fields on micron scales. The physical principles underlying the organization and control of active-matter driven fluid flows are poorly understood. Here, we apply an optically-controlled active-matter system composed of microtubule filaments and light-switchable kinesin motor proteins to analyze the emergence of persistent flow fields in a model active matter system. Using light, we form contractile microtubule networks of varying shape. We analyze the fluid flow fields generated by a wide range of microtubule network geometries and explain the resulting flow fields within a unified theoretical framework. We specifically demonstrate that the geometry of microtubule flux at the boundary of contracting microtubule networks predicts the steady-state fluid flow fields across polygonal network geometries through finite-element simulations. Our work provides a foundation for programming microscopic fluid-flows with controllable active matter and could enable the engineering of versatile and dynamic microfluidic devices.

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