论文标题

果蝇机翼的降低性降低,如表型的无里程碑

Dimensionality-Reduction in the Drosophila Wing as Revealed by Landmark-Free Measure-ments of Phenotype

论文作者

Alba, Vasyl, Carthew, James E., Carthew, Richard W., Mani, Madhav

论文摘要

有机体表型来自一组复杂的基因型相互作用。尽管测序方面的技术进步提供了对生物体基因型的定量描述,但对生物体的物理表型的表征远远落后。在这里,我们将基因型与使用果蝇翼作为模型系统的解剖结构的复杂和多维表型相关联。我们开发了一种数学方法,可以对生物学上显着的表型变异进行强有力的描述。分析发育过程中遗传和环境条件下弱扰动产生的自然表型变异以及变异,我们观察到了高度约束的机翼表型。在降低维度降低的引人注目的前样本中,果蝇发育过程产生的品种的性质被限制为机翼中单个综合变异模式。我们的策略证明了果蝇机翼的基因型到表型图中的新兴简单性表现出来,并且可能代表着一种询问各种基因型 - 表型关系的一般方法。

Organismal phenotypes emerge from a complex set of genotypic interactions. While technological advances in sequencing provide a quantitative description of an organism's genotype, characterization of an organism's physical phenotype lags far behind. Here, we relate genotype to the complex and multi-dimensional phenotype of an anatomical structure using the Drosophila wing as a model system. We develop a mathematical approach that enables a robust description of biologically salient phenotypic variation. Analysing natural phenotypic variation, and variation generated by weak perturbations in genetic and environmental conditions during development, we observe a highly constrained set of wing phenotypes. In a striking ex-ample of dimensionality reduction, the nature of varieties produced by the Drosophila developmental pro-gram is constrained to a single integrated mode of variation in the wing. Our strategy demonstrates the emergent simplicity manifest in the genotype-to-phenotype map in the Drosophila wing and may represent a general approach for interrogating a variety of genotype-phenotype relationships.

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