论文标题

各向异性3D多流CNN,可从多平面MRI中进行准确的前列腺分割

Anisotropic 3D Multi-Stream CNN for Accurate Prostate Segmentation from Multi-Planar MRI

论文作者

Meyer, Anneke, Chlebus, Grzegorz, Rak, Marko, Schindele, Daniel, Schostak, Martin, van Ginneken, Bram, Schenk, Andrea, Meine, Hans, Hahn, Horst K., Schreiber, Andreas, Hansen, Christian

论文摘要

背景和客观:MR图像中前列腺的准确和可靠分割可以支持前列腺癌的临床评估,以及对局灶性和现场区域治疗干预措施的计划和监测。尽管由于标准化方案而供应多个平面MR扫描,但文献中介绍的大多数分割方法仅考虑轴向扫描。方法:我们提出了各向异性3D多流CNN体系结构,该体系结构处理其他扫描方向以产生高分辨率的各向同性前列腺分割。我们研究了架构的两个变体,它们分别在两个(双平面)和三个(三平面)图像方向上起作用。我们将它们与文献中使用的标准基线(单平面)(即普通轴向分割)进行了比较。为了实现公平的比较,我们采用超参数优化策略来为单个方法选择最佳配置。结果:跨越多个站点的两个数据集上的培训和评估可获得对普通轴向分割的显着改善(骰子相似性系数的$ p <0.05 $)。可以观察到改进,尤其是在基础上($ 0.898 $单平面,$ 0.906 $三平面)和Apex($ 0.888 $单平面$ 0.901 $ 0.901 $ DUAL-PLANE)。结论:这项研究表明,采用两个或三个扫描方向的模型优于普通轴向分割。对前列腺精确边界的了解对于保护风险结构至关重要。因此,提出的模型有可能改善前列腺癌诊断和疗法的结果。

Background and Objective: Accurate and reliable segmentation of the prostate gland in MR images can support the clinical assessment of prostate cancer, as well as the planning and monitoring of focal and loco-regional therapeutic interventions. Despite the availability of multi-planar MR scans due to standardized protocols, the majority of segmentation approaches presented in the literature consider the axial scans only. Methods: We propose an anisotropic 3D multi-stream CNN architecture, which processes additional scan directions to produce a higher-resolution isotropic prostate segmentation. We investigate two variants of our architecture, which work on two (dual-plane) and three (triple-plane) image orientations, respectively. We compare them with the standard baseline (single-plane) used in literature, i.e., plain axial segmentation. To realize a fair comparison, we employ a hyperparameter optimization strategy to select optimal configurations for the individual approaches. Results: Training and evaluation on two datasets spanning multiple sites obtain statistical significant improvement over the plain axial segmentation ($p<0.05$ on the Dice similarity coefficient). The improvement can be observed especially at the base ($0.898$ single-plane vs. $0.906$ triple-plane) and apex ($0.888$ single-plane vs. $0.901$ dual-plane). Conclusion: This study indicates that models employing two or three scan directions are superior to plain axial segmentation. The knowledge of precise boundaries of the prostate is crucial for the conservation of risk structures. Thus, the proposed models have the potential to improve the outcome of prostate cancer diagnosis and therapies.

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