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Topologically-ordered phases of matter, although stable against local perturbations, are usually restricted to relatively small regions in phase diagrams. Their preparation requires thus a precise fine tunning of the system's parameters, a very challenging task in most experimental setups. In this work, we investigate a model of spinless fermions interacting with dynamical $\mathbb{Z}_2$ gauge fields on a cross-linked ladder, and show evidence of topological order throughout the full parameter space. In particular, we show how a magnetic flux is spontaneously generated through the ladder due to an Aharonov-Bohm instability, giving rise to topological order even in the absence of a plaquette term. Moreover, the latter coexists here with a symmetry-protected topological phase in the matter sector, that displays fractionalised gauge-matter edge states, and intertwines with it by a flux-threading phenomenon. Finally, we unveil the robustness of these features through a gauge frustration mechanism, akin to geometric frustration in spin liquids, allowing topological order to survive to arbitrarily large quantum fluctuations. In particular, we show how, at finite chemical potential, topological solitons are created in the gauge field configuration, which bound to fermions forming $\mathbb{Z}_2$ deconfined quasi-particles. The simplicity of the model makes it an ideal candidate where 2D gauge theory phenomena, as well as exotic topological effects, can be investigated using cold-atom quantum simulators.