论文标题

耦合分子振荡器的非平衡热力学:同步的能量成本和最佳设计

Nonequilibrium thermodynamics of coupled molecular oscillators: The energy cost and optimal design for synchronization

论文作者

Zhang, Dongliang, Cao, Yuansheng, Ouyang, Qi, Tu, Yuhai

论文摘要

提出了一种耦合分子振荡器的模型来研究同步的非平衡热力学。我们发现,即使振荡器振荡器耦合是保守的,非平衡振荡器的同步也成本能量。通过分析地求解多体系统的稳态,我们表明该系统经历了由能量耗散驱动的非平衡相变,关键的能量耗散取决于交换反应的频率和强度。此外,我们的研究揭示了与固定能量预算达到最大同步的最佳设计。我们将我们的一般理论应用于氰基细菌时钟的KAI系统,并预测KAIC ATPase活性与KAIC六聚体的同步之间的关系。可以扩展理论框架以研究其他扩展非平衡活性系统中集体行为的热力学。

A model of coupled molecular oscillators is proposed to study nonequilibrium thermodynamics of synchronization. We find that synchronization of nonequilibrium oscillators costs energy even when the oscillator-oscillator coupling is conservative. By solving the steady state of the many-body system analytically, we show that the system goes through a nonequilibrium phase transition driven by energy dissipation, and the critical energy dissipation depends on both the frequency and strength of the exchange reactions. Moreover, our study reveals the optimal design for achieving maximum synchronization with a fixed energy budget. We apply our general theory to the Kai system in Cyanobacteria circadian clock and predict a relationship between the KaiC ATPase activity and synchronization of the KaiC hexamers. The theoretical framework can be extended to study thermodynamics of collective behaviors in other extended nonequilibrium active systems.

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